We’ve rebranded some of our products, learn more ›
CODEX® is now PhenoCycler, Phenoptics™ is now Phenolmager.
Software Support
Stay Informed about PhenoCycler® and PhenoImager® Software Updates
PhenoCycler-Fusion and PhenoImager Fusion Instrument Software Updates
The PhenoCycler® -Fusion and PhenoImager® Fusion instruments come equipped with software modules for designing experiment panels, operating the instrument, and processing images. Customers receive updates as part of the periodic software update schedule.
Contact a sales representative about PhenoCycler-Fusion software support and updates.
PhenoImager HT Instrument Software Updates
Akoya Software Version Compatibility
Some files are read by multiple Akoya acquisition and analysis software programs to facilitate unmixing and analysis workflows. Due to major updates in the combined release of PhenoImager HT 2.1.0, Phenochart 2.2.0, and inForm 3.0.0 software, outputs from these versions are not backward compatible with previous versions of software. However, files from previous versions of software are forward compatible. These compatibility considerations are detailed in the Akoya Software Compatibility Considerations Table (below)
** Two considerations:
- Due to the slight changes to the assignment of cell IDs, phenotyping training sets from inForm 2.x.x cannot be used for re-training phenotyping classifiers in inForm 3.x.x. In this case, inForm 3.x.x will post a message that you can run the algorithm’s phenotype step with its current training, or use inForm 2.8 or earlier to add training cells or revise phenotyping.
- For projects created in inForm 2.8 with imagery that has 10+ channels, phenotyping computation may become unusably slow in inForm 3.x.x. It is recommended that inForm 2.8 projects with imagery that has 10+ channels are only run in inForm 2.8. New projects created in inForm 3.0 do not have this issue.
PhenoImager Analysis Software Updates
Phenochart Whole Slide Viewer
inForm® Tissue Analysis Software
inForm provides you with the tools to visualize, analyze, quantify, and phenotype immune and other cells within solid tissue and tissue microarrays. The advanced unmixing algorithm differentiates and separates faintly expressed and overlapping signals from background autofluorescence.
Please Note: Customers with inForm 2.0 or earlier will need to upgrade their software license to update to version 3.0*. Please contact your Akoya sales representative for purchase details.
How to install:
- Download and unzip R installation (version R 3.1.0)
- Double click on install_R_and_packages.bat
(Please Note: R 3.1.0 only needs to be installed the first time inForm is installed on a computer) - Download and install inForm Setup
*Windows 10, 64-bit platforms only.
inForm 3.1 software update
- inForm 3.1 software update
R-installation Package (first time installation only)
Release Notes
phenoptr & phenoptrReports
Release Notes Setup Files User Guide Technical Note Tutorials
